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“Crystallography enables us to see a single atom in the highest resolution now in existence. ”
Dirk Zajonc, Ph.D.
Assistant Member
Contact
biography
cell-bullet1.jpg“Crystallography enables us to see a single atom in the highest resolution now in existence. Having this detailed, structured image is a significant advantage in combating disease because it’s easier to stop what you can see.”

Dirk Zajonc, Ph.D.Dr. Zajonc joined LIAI in 2006 as an Assistant Member in the Division of Cellular Biology. Dr. Zajonc and his team determine the three-dimensional structures of immune system proteins at the atomic level using protein crystallography.

Dr. Zajonc received his M. Sc from the University of Erlangen-Nuremberg (Germany) in 1998 and his Ph. D. in biochemistry in 2001. He completed his postdoctoral training at the Scripps Research Institute in 2006. Dr. Zajonc received an Investigator award from the Cancer Research institute in 2007.

Dr. Zajonc is an Editorial Board Member for two newly established open-access journals, Lipid Insights and Glycobiology Insights.

research focus
cell-bullet2.jpgOur group is primarily interested in the structural basis of immune recognition of lipids, how these lipids can modulate an immune response, or how lipid modification of immunologically important proteins can affect immune signalling.
selected publications

cell-bullet3.jpgCrystal Structure of Bovine CD1b3 with Endogenously Bound Ligands. J Immunol. 2010

Synthesis and Evaluation of Amino-Modified alpha-GalCer Analogues. Org Lett. 2010 

Allosteric regulation of the ubiquitin:NIK and ubiquitin:TRAF3 E3 ligases by the lymphotoxin-beta receptor. J Biol Chem. 2010 

Structural basis for lipid-antigen recognition in avian immunity. J Immunol. 2010

Lipid binding orientation within CD1d affects recognition of Borrelia burgorferi antigens by NKT cells. Proc Natl Acad Sci U S A. 2010 

Mechanisms for glycolipid antigen-driven cytokine polarization by Valpha14i NKT cells.
J Immunol. 2010 

Adaptability of the semi-invariant natural killer T-cell receptor towards structurally diverse CD1d-restricted ligands. EMBO J. 2009

Synthesis of dideoxymycobactin antigens presented by CD1a reveals T cell fine specificity for natural lipopeptide structures. J Biol Chem. 2009 

Carbohydrate specificity of the recognition of diverse glycolipids by natural killer T cells. Immunol Rev. 2009

The crystal structure of avian CD1 reveals a smaller, more primordial antigen-binding pocket compared to mammalian CD1. Proc Natl Acad Sci. 2008

pH-dependent interdomain tethers regulate antigen capturre by CD1b. Immunity. 2008

Crystal structures of mouse CD1d-iGb3 complex and its cognate Valpha14 T cell receptor suggest a model for duel recognition of foreign and self glycolipids. J Mol Biol. 2008

CD1 mediated T cell recognition of glycolipids. Curr Opin Struct Biol. 2007

Architecture of CD 1 proteins. Curr Top Microbiol Immunolo. 2007 

Structural characterization of mycobacterial phosphatidylinositol mannoside binding to mouse CD1d. J Immunol. 2006 

Natural killer T cells recognize diacylglycerol antigens from pathogenic bacteria. Nat Immunol. 2006

Role of lipid trimming and CD1 groove size in cellular antigen presentation. EMBO J. 2006

Design of natural killer T cell activators: structure and function of a microbial glycosphingolipid bound to mouse CD1d. Proc Natl Acad Sci U S A. 2006

Structural basis for CD1d presentation of a sulfatide derived from myelin and its implications for autoimmunity. J Exp Med. 2005

Structure and function of a potent agonist for the semi-invariant natural killer T cell receptor. Nat Immunol. 2005

T-cell activation by lipopeptide antigens. Curr Opin Immunol. 2005

Anatomy of CD1-lipid antigen complexes.Nat Rev Immunol. 2005

CD1 assembly and the formation of CD1-antigen complexes.Curr Opin Immunol. 2005

Molecular mechanism of lipopeptide presentation by CD1a. Immunity. 2005

T cell activation by lipopeptide antigens. Science. 2004

Crystal structure of CD1a in complex with a sulfatide self antigen at a resolution of 2.15 A. Nat Immunol. 2003

View all publications
The link above may include papers by scientists with the same or similar name.

staff list

Click researcher's name for e-mail. Dial 858-752-6500 to call.

Dani Becker
Hay Dvir
Enrico Girardi Lixia Guo
Viola Huynh Michael Matho
Ivana Tomcova Jing Wang
Dirk Zajonc Esther Yu

upcoming seminars
  • Joel Ernst,  "The Immunological Life cycle of Tuberculosis",  Wednesday, 09/08/10: 12:00 PM
  • David Nemazee,  "Genetics and biochemical analysis of B cell tolerance",  Wednesday, 09/15/10: 12:00 PM
  • More Seminars
links
AWARDS AND HONORS
  • CRI Investigator Award from the Cancer Research Institute, 2007
  • Travel Award from the Society of Fellows at the TSRI Winter Research Symposium, February 3rd 2005. Best talk in the Immunology Section, 2005
  • Selected by the Skaggs Institute for Chemical Biology as a Skaggs Postdoctoral Fellow, 2002
  • Postdoctoral Research Fellowship of the German Research Foundation (DFG), 2001- 2003
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